Uses of Class
net.maizegenetics.pangenome.api.HaplotypeGraphBuilderPlugin

Packages that use HaplotypeGraphBuilderPlugin

Package	Description
net.maizegenetics.pangenome.api

Uses of HaplotypeGraphBuilderPlugin in net.maizegenetics.pangenome.api

Methods in net.maizegenetics.pangenome.api that return HaplotypeGraphBuilderPlugin

Modifier and Type	Method and Description
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.anchorFile(String value) Set Anchor File.
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.configFile(String value) Set Database Config File.
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.hapids(SortedSet<Integer> value) Set Haplotype Ids.
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.includeVariantContexts(Boolean value) Set Include Variant Contexts.
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.method(String value) Set Consensus Method.
HaplotypeGraphBuilderPlugin	HaplotypeGraphBuilderPlugin.onlyAnchors(Boolean value) Set Only Anchors.