net.maizegenetics.pangenome.db_loading

Class GetDBConnectionPlugin

java.lang.Object

net.maizegenetics.plugindef.AbstractPlugin

net.maizegenetics.pangenome.db_loading.GetDBConnectionPlugin

All Implemented Interfaces:

Runnable, net.maizegenetics.plugindef.Plugin, net.maizegenetics.plugindef.PluginListener, net.maizegenetics.util.ProgressListener

public class GetDBConnectionPlugin
extends net.maizegenetics.plugindef.AbstractPlugin

Plugin takes a configFile with db specifics and a boolean indicating whether a new db shoudl be created. Output is a db COnnection object. INPUT: Config file containing these 5 lines (additional lines are ignored) host= user= password= DB= DBtype= boolean: TRUE means create a new db if it doesn't exist, false means return null if db doesn't exist If db exists and boolean is TRUE, the db will be deleted and a new one of that name created. OUTPUT: A db Connection object

Author:

lcj34

Field Summary

Fields inherited from class net.maizegenetics.plugindef.AbstractPlugin

DEFAULT_CITATION, POSITION_LIST_NONE, TAXA_LIST_NONE

Constructor Summary

Constructors

Constructor and Description
GetDBConnectionPlugin()
GetDBConnectionPlugin(Frame parentFrame)
GetDBConnectionPlugin(Frame parentFrame, boolean isInteractive)

Method Summary

Modifier and Type	Method and Description
String	configFile() File containing lines with data for host=, user=, password= and DB=, DBtype= used for db connection
GetDBConnectionPlugin	configFile(String value) Set DB Config Files.
Boolean	createNew() True indicates a new DB of this name should be created, deleting any existing DB of this name.
GetDBConnectionPlugin	createNew(Boolean value) Set Create New DB.
String	getButtonName()
ImageIcon	getIcon()
String	getToolTipText()
static void	main(String[] args)
net.maizegenetics.plugindef.DataSet	processData(net.maizegenetics.plugindef.DataSet input)

Methods inherited from class net.maizegenetics.plugindef.AbstractPlugin

addListener, cancel, convert, dataSetReturned, getCitation, getInputs, getMenu, getPanel, getParameter, getParameter, getParentFrame, getUsage, getUsageHTML, isInteractive, performFunction, pluginDescription, pluginUserManualURL, progress, progress, receiveInput, reverseTrace, run, setConfigParameters, setParameter, setParameter, setParameter, setParameters, setParametersToDefault, setThreaded, trace, wasCancelled

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.maizegenetics.plugindef.Plugin

getPluginInstance, getPluginInstance, isPlugin

Constructor Detail

GetDBConnectionPlugin

public GetDBConnectionPlugin()

GetDBConnectionPlugin

public GetDBConnectionPlugin(Frame parentFrame)

GetDBConnectionPlugin

public GetDBConnectionPlugin(Frame parentFrame,
                             boolean isInteractive)

Method Detail

processData

public net.maizegenetics.plugindef.DataSet processData(net.maizegenetics.plugindef.DataSet input)

Specified by:

processData in interface net.maizegenetics.plugindef.Plugin

Overrides:

processData in class net.maizegenetics.plugindef.AbstractPlugin

main

public static void main(String[] args)

getIcon

public ImageIcon getIcon()

getButtonName

public String getButtonName()

getToolTipText

public String getToolTipText()

configFile

public String configFile()

File containing lines with data for host=, user=, password= and DB=, DBtype= used for db connection

Returns:

DB Config Files

configFile

public GetDBConnectionPlugin configFile(String value)

Set DB Config Files. File containing lines with data for host=, user=, password= and DB=, DBtype= used for db connection

Parameters:

value - DB Config Files

Returns:

this plugin

createNew

public Boolean createNew()

True indicates a new DB of this name should be created, deleting any existing DB of this name. False means return connection to existing DB or NULL

Returns:

Create New DB

createNew

public GetDBConnectionPlugin createNew(Boolean value)

Set Create New DB. True indicates a new DB of this name should be created, deleting any existing DB of this name. False means return connection to existing DB or NULL

Parameters:

value - Create New DB

Returns:

this plugin