Uses of Class
net.maizegenetics.pangenome.hapCalling.FastqToKmerCountPlugin

Packages that use FastqToKmerCountPlugin

Package	Description
net.maizegenetics.pangenome.hapCalling

Uses of FastqToKmerCountPlugin in net.maizegenetics.pangenome.hapCalling

Methods in net.maizegenetics.pangenome.hapCalling that return FastqToKmerCountPlugin

Modifier and Type	Method and Description
FastqToKmerCountPlugin	FastqToKmerCountPlugin.debugTaxon(String value) Set Debug Taxon.
FastqToKmerCountPlugin	FastqToKmerCountPlugin.exportHaplotypeFile(String value) Set Export Haplo File.
FastqToKmerCountPlugin	FastqToKmerCountPlugin.haplotypesGenomeFile(String value) Set Haplotype File.
FastqToKmerCountPlugin	FastqToKmerCountPlugin.numErrorAllowed(Integer value) Set Allowed Error.
FastqToKmerCountPlugin	FastqToKmerCountPlugin.readFile(String value) Set Raw Read File.
FastqToKmerCountPlugin	FastqToKmerCountPlugin.refGenomeFile(String value) Set Ref File.