Uses of Class
net.maizegenetics.pangenome.hapCalling.PathToIgraphPlugin

Packages that use PathToIgraphPlugin

Package	Description
net.maizegenetics.pangenome.hapCalling

Uses of PathToIgraphPlugin in net.maizegenetics.pangenome.hapCalling

Methods in net.maizegenetics.pangenome.hapCalling that return PathToIgraphPlugin

Modifier and Type	Method and Description
PathToIgraphPlugin	PathToIgraphPlugin.configFile(String value) Set Database Config File.
PathToIgraphPlugin	PathToIgraphPlugin.countMethod(String value) Set Haplotype count method name.
PathToIgraphPlugin	PathToIgraphPlugin.fastqName(String value) Set Fastq name.
PathToIgraphPlugin	PathToIgraphPlugin.outputBase(String value) Set Output file base.
PathToIgraphPlugin	PathToIgraphPlugin.pathName(String value) Set Path method name.
PathToIgraphPlugin	PathToIgraphPlugin.refRangeFile(String value) Set Ref Range File.
PathToIgraphPlugin	PathToIgraphPlugin.splitTransitionProb(Double value) Set Split Prob.
PathToIgraphPlugin	PathToIgraphPlugin.taxaFilter(net.maizegenetics.taxa.TaxaList value) Set Taxa.
PathToIgraphPlugin	PathToIgraphPlugin.taxonName(String value) Set Taxon name.