| Class | Description |
|---|---|
| ConvertGBSToSNPs | |
| ConvertGBSUtils | |
| ConvertRampSeqTagsToMapPlugin |
Created by zrm22 on 10/4/17.
|
| ExportHaplotypePathToFilePlugin |
Plugin to export the Multimap
|
| ExportVCForTaxonMethodPlugin |
Exports variant context lists to vcf file.
|
| FastqToHapCountPlugin |
Plugin to run the read counting method based on bwa mem alignment.
|
| FastqToKmerCountPlugin |
Created by zrm22 on 10/23/17.
|
| FilterFastqUsingBAMPlugin |
Created by zrm22 on 9/13/17.
|
| HapCallingUtils |
Created by zrm22 on 8/29/17.
|
| HapCountBestPathPlugin | |
| HapCountBestPathToTextPlugin |
This plugin processes haplotype node data either from of an inclusion file, or from PHG database
tables.
|
| ImportHaplotypePathFilePlugin |
Plugin to import the haplotypePath files produced by ExportHaplotypePathToFilePlugin.
|
| IndexHaplotypeKmersPlugin |
author edbuckler
|
| PathsToVCFPlugin | |
| PathToIgraphPlugin | |
| ScoreRangesByInclusionCountsPlugin |
Created by zrm22 on 10/11/17.
|
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