Package net.maizegenetics.pangenome.multiSequenceAlignment

Class Summary

Class	Description
ComputeNDistribution	Simple One off Main class to compute how many Ns we have over all the basepairs of all the anchors TODO if needed in pipeline, Refractor into TASSEL code Created by zrm22 on 5/25/17.
RemoveLongRunNs	Simple test utility(script) which will remove Ns from a list of files TODO Refractor out the methods to be more object oriented Created by zrm22 on 6/7/17.
SplitMafftRun	Simple utility to create a multithreaded script to run multiple anchors through MAFFT at a single time.