net.maizegenetics.pangenome.pipelineTests

Classes

• CompareToKnownSNPPlugin
• ContrastHaplotypeAndAssemblySequence
• CountConsensusTaxaAtRefRange
• CountNsInRawHapSequencesPlugin
• EvaluateGVCFbyKnownSNPTest
• EvaluateGVCFbyKnownSNPTest2
• EvaluateGVCFWithIBDTest
• EvaluateHaplotypeFastaInKnownIBDRegions
• FindProteomeGenesInAssembly
• SimpleGVCFReader